Protein Alignment LSm-4 and COMMD5

DIOPT Version :9

• Sequence 1: NP_001027237.1
• Gene: LSm-4 / 3772280
• FlyBaseID: FBgn0067622
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001074472.1
• Gene: COMMD5 / 28991
• HGNCID: 17902
• Length: 224
• Species: Homo sapiens
• Alignment Length: 198
• Identity: 43/198 - (21%)
• Similarity: 85/198 - (42%)
• Gaps: 42/198 - (21%)

  Fly    23 LTKSMLRVLIQVSVHYIESKKSSSEVLSLA---------LNKLTNGGHEIPPNFCELFTMVFLTM 78
            |.:|..|.|::..|..::.:.....|..|.         |..|..|.|.:              :
Human    43 LDRSTFRKLLKFVVSSLQGEDCREAVQRLGVSANLPEEQLGALLAGMHTL--------------L 93

  Fly    79 QIFLRYPKGVVKHHELRKCLMDDLNLTEEYVEDICKVLLNHRDVLSKNFSDTKMDRV-------- 135
            |..||.|...:|....|..| .:|.:.::.|.|:..|:...:..|        :|.|
Human    94 QQALRLPPTSLKPDTFRDQL-QELCIPQDLVGDLASVVFGSQRPL--------LDSVAQQQGAWL 149

  Fly   136 -KMSKLQWRINISLSLNTVQID-KPTIVLHFKLQNKEYRTLELPLSMFQQVRYNIALLLNELQSL 198
             .::..:||:::::|.:.:... :|::::..||.:......|:|.:.||::||::||:|.|:..|
Human   150 PHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVLKEMADL 214

  Fly   199 QSR 201
            :.|
Human   215 EKR 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm-4	NP_001027237.1	HCaRG	22..196	CDD:284632	41/191 (21%)
COMMD5	NP_001074472.1	Commd5_HCaRG	115..224	CDD:240101	25/111 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165144535
Domainoid	1	1.000	44	1.000	Domainoid score	I12353
eggNOG	1	0.900	-	-		E1_295KW
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	48	1.000	Inparanoid score	I5487
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG48482
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0008039
OrthoInspector	1	1.000	-	-		oto89551
orthoMCL	1	0.900	-	-		OOG6_106615
Panther	1	1.100	-	-	LDO	PTHR15666
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	10	9.800