Protein Alignment LSm-4 and Commd5

DIOPT Version :10

• Sequence 1: NP_001027237.1
• Gene: LSm-4 / 3772280
• FlyBaseID: FBgn0067622
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_620808.2
• Gene: Commd5 / 245974
• RGDID: 621468
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 194
• Identity: 42/194 - (21%)
• Similarity: 88/194 - (45%)
• Gaps: 26/194 - (13%)

  Fly    23 LTKSMLRVLIQVSVHYIESK--KSSSEVLSLALN-------KLTNGGHEIPPNFCELFTMVFLTM 78
            |.:|..|.|:::.|..:..|  :.:.|.|..:.|       .|..|.|.:              :
  Rat    43 LDRSTFRKLLKLVVGALHGKDCREAVEQLGASANLSEERLAVLLAGTHTL--------------L 93

  Fly    79 QIFLRYPKGVVKHHELRKCLMDDLNLTEEYVEDICKVLL-NHRDVLSKNFSDTKMDRVKMSKLQW 142
            |..||.|...:|....::.| .:|.:.::.:.|:..:.. :.|.:|.............||..:|
  Rat    94 QQALRLPPASLKPDAFQEEL-QELGIPQDLIGDLASLAFGSQRPLLDSVAQQQGSSLPHMSYFRW 157

  Fly   143 RINISLSLNTVQID-KPTIVLHFKLQNKEYRTLELPLSMFQQVRYNIALLLNELQSLQSRLALK 205
            |:::::|.:..... :|::::..||.:......|:|::.||::||::||:|.|:..|:.:...|
  Rat   158 RVDVAISTSAQSRSLQPSVLMQLKLTDGSAHRFEVPIAKFQELRYSVALILKEMAELEKKCERK 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm-4	NP_001027237.1	Commd	101..205	CDD:471425	23/105 (22%)
Commd5	NP_620808.2	Commd5_HCaRG	115..224	CDD:240101	24/107 (22%)