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Protein Alignment LSm-4 and commd5
DIOPT Version :9
Sequence 1: | NP_001027237.1 |
Gene: | LSm-4 / 3772280 |
FlyBaseID: | FBgn0067622 |
Length: | 205 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_031746561.1 |
Gene: | commd5 / 100380154 |
XenbaseID: | XB-GENE-952087 |
Length: | 223 |
Species: | Xenopus tropicalis |
Alignment Length: | |
Identity: | / - (0%) |
Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LSm-4 | NP_001027237.1 |
HCaRG |
22..196 |
CDD:284632 |
|
commd5 | XP_031746561.1 |
Commd5_HCaRG |
114..223 |
CDD:240101 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
49 |
1.000 |
Domainoid score |
I11712 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
67 |
1.000 |
Inparanoid score |
I5169 |
OMA |
1 |
1.010 |
- |
- |
|
QHG48482 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0008039 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto103373 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15666 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R5085 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 9.100 |
|
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