DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33886 and H2bl1

DIOPT Version :10

Sequence 1:NP_001027340.1 Gene:His2B:CG33886 / 3772271 FlyBaseID:FBgn0053886 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_001396034.1 Gene:H2bl1 / 684444 RGDID:1590323 Length:123 Species:Rattus norvegicus


Alignment Length:89 Identity:46/89 - (51%)
Similarity:64/89 - (71%) Gaps:0/89 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRL 98
            :|::||.:|||:|.|..||||..:.|||..:||||||||.||.:..:..||.|:||.:||.||.:
  Rat    35 NYSLYINRVLKEVVPKRGISSHTVDIMNLMINDIFERIATEACQRMNLRKRCTLTSEDIQKAVYM 99

  Fly    99 LLPGELAKHAVSEGTKAVTKYTSS 122
            |:|.:|||.||:.|:|||.::..|
  Rat   100 LMPKKLAKLAVTFGSKAVHRFIHS 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33886NP_001027340.1 HFD_H2B 33..120 CDD:467035 45/85 (53%)
H2bl1NP_001396034.1 HFD_H2B 33..120 CDD:467035 45/84 (54%)

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