DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33886 and H2bc1

DIOPT Version :10

Sequence 1:NP_001027340.1 Gene:His2B:CG33886 / 3772271 FlyBaseID:FBgn0053886 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_783594.1 Gene:H2bc1 / 319177 MGIID:2448375 Length:127 Species:Mus musculus


Alignment Length:126 Identity:102/126 - (80%)
Similarity:110/126 - (87%) Gaps:5/126 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKTSGKAAKKAGKA-QKNITKTDK----KKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNS 62
            |:.:.|.|..:.|. :|.:|||.|    |:||.|||||:||||||||||||||||||||||||||
Mouse     2 PEVAVKGATISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNS 66

  Fly    63 FVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
            ||.|||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    67 FVTDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33886NP_001027340.1 HFD_H2B 33..120 CDD:467035 83/86 (97%)
H2bc1NP_783594.1 HFD_H2B 31..124 CDD:467035 87/92 (95%)

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