DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2B:CG33886 and his-41

DIOPT Version :10

Sequence 1:NP_001027340.1 Gene:His2B:CG33886 / 3772271 FlyBaseID:FBgn0053886 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_505464.1 Gene:his-41 / 179340 WormBaseID:WBGene00001915 Length:123 Species:Caenorhabditis elegans


Alignment Length:122 Identity:99/122 - (81%)
Similarity:108/122 - (88%) Gaps:1/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPKTSGKAAKKAGKAQKNITKTDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVND 66
            |||.|.|.||||.|.... .|..||:|..|||||::|||:||||||||||:||||||||||||||
 Worm     3 PPKPSAKGAKKAAKTVSK-PKDGKKRKHARKESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVND 66

  Fly    67 IFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
            :|||||:||||||||||||||:||||||||||:||||||||||||||||||||||||
 Worm    67 VFERIASEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSSK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33886NP_001027340.1 HFD_H2B 33..120 CDD:467035 78/86 (91%)
his-41NP_505464.1 HFD_H2B 27..120 CDD:467035 81/92 (88%)

Return to query results.
Submit another query.