DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2B:CG33886 and hist1h2a11

DIOPT Version :9

Sequence 1:NP_001027340.1 Gene:His2B:CG33886 / 3772271 FlyBaseID:FBgn0053886 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_001136058.2 Gene:hist1h2a11 / 100004011 ZFINID:ZDB-GENE-081205-1 Length:127 Species:Danio rerio


Alignment Length:143 Identity:36/143 - (25%)
Similarity:48/143 - (33%) Gaps:63/143 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KTSGKAAKKAGKAQKNITKTDKKK-----------KRKRKESYA--------IYIYKVLKQVHPD 49
            ||.|||..||        ||...:           :..||.:||        :|:..||      
Zfish     6 KTGGKARAKA--------KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVL------ 56

  Fly    50 TGISSKAMSIMNSFVNDIFERIAAE----ASRLAHYNKRSTITSREIQTAVR------LLLPG-E 103
                               |.:.||    |...|..||::.|..|.:|.|||      .||.| .
Zfish    57 -------------------EYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVT 102

  Fly   104 LAKHAVSEGTKAV 116
            :|:..|....:||
Zfish   103 IAQGGVLPNIQAV 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33886NP_001027340.1 H2B 33..121 CDD:197718 25/103 (24%)
hist1h2a11NP_001136058.2 PTZ00017 1..127 CDD:185399 36/143 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.