DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33868 and his-41

DIOPT Version :9

Sequence 1:NP_001027385.1 Gene:His2B:CG33868 / 3772265 FlyBaseID:FBgn0053868 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_505464.1 Gene:his-41 / 179340 WormBaseID:WBGene00001915 Length:123 Species:Caenorhabditis elegans


Alignment Length:122 Identity:99/122 - (81%)
Similarity:108/122 - (88%) Gaps:1/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPKTSGKAAKKAGKAQKNITKTDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVND 66
            |||.|.|.||||.|.... .|..||:|..|||||::|||:||||||||||:||||||||||||||
 Worm     3 PPKPSAKGAKKAAKTVSK-PKDGKKRKHARKESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVND 66

  Fly    67 IFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
            :|||||:||||||||||||||:||||||||||:||||||||||||||||||||||||
 Worm    67 VFERIASEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSSK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33868NP_001027385.1 H2B 33..121 CDD:197718 79/87 (91%)
his-41NP_505464.1 H2B 25..121 CDD:197718 84/95 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165132
Domainoid 1 1.000 140 1.000 Domainoid score I2949
eggNOG 1 0.900 - - E1_KOG1744
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128594
Inparanoid 1 1.050 197 1.000 Inparanoid score I2502
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53922
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000065
OrthoInspector 1 1.000 - - otm14146
orthoMCL 1 0.900 - - OOG6_100082
Panther 1 1.100 - - O PTHR23428
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2558
SonicParanoid 1 1.000 - - X77
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.830

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