DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp7

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_110459.1 Gene:Fabp7 / 80841 RGDID:69312 Length:132 Species:Rattus norvegicus


Alignment Length:110 Identity:55/110 - (50%)
Similarity:73/110 - (66%) Gaps:1/110 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDE 72
            :||..|:|||||||.||||..||::||...|||.::.||....:.|..|||.:.|||:||.||:|
  Rat     9 WKLTDSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGGKVVIRTQCTFKNTEISFQLGEEFEE 73

  Fly    73 ETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELITLI 116
            .::|.||.||:|.|||:||...||.| |.|..|||..|.:::..:
  Rat    74 TSIDDRNCKSVIRLDGDKLIHVQKWDGKETNCVREIKDGKMVVTL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 55/108 (51%)
Fabp7NP_110459.1 lipocalin_FABP 2..131 CDD:471979 55/110 (50%)

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