DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fabp and fabp10b

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001373767.1 Gene:fabp10b / 795210 ZFINID:ZDB-GENE-100217-2 Length:128 Species:Danio rerio


Alignment Length:116 Identity:28/116 - (24%)
Similarity:61/116 - (52%) Gaps:7/116 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDE 72
            :||.:.||.:|:::.|.......:|...:.|...:..:|:.::::..:..:::..:|::|.|.:.
Zfish     9 WKLYEQENAEEFLRALSAPEHYIRMLQEVRPVTVIRQQGEEFSISVQTALRSNTNTFRIGTESEF 73

  Fly    73 ETLDGRNVKSIITL-DGNKLTQEQKGDKPTTIVREFTDNELITLIP--HLT 120
            .||||:.:.:...| ||..:.:.:|    .|.|||..|.|::..:.  |:|
Zfish    74 TTLDGQKINATARLIDGKIVIESEK----FTHVRELRDGEMLETLTAGHVT 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 26/108 (24%)
fabp10bNP_001373767.1 lipocalin_FABP 4..127 CDD:471979 28/116 (24%)

Return to query results.
Submit another query.