DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and rbp1.1

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_998060.2 Gene:rbp1.1 / 791484 ZFINID:ZDB-GENE-050421-2 Length:132 Species:Danio rerio


Alignment Length:93 Identity:36/93 - (38%)
Similarity:55/93 - (59%) Gaps:3/93 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDE 72
            :|:..:.|| ||:|.|.|.:..||:...|.|..:::..||.:.:.|.||||...:.|.:|.||:|
Zfish     8 WKMISNNNF-EYLKALDVNVAIRKIAILLRPDKDISQNGDHFVIKTVSTFKNYDMDFVVGQEFEE 71

  Fly    73 E--TLDGRNVKSIITLDGNKLTQEQKGD 98
            :  .:|||...:.||.||:||...|||:
Zfish    72 DLGPVDGRKCMTTITWDGDKLVCVQKGE 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 36/93 (39%)
rbp1.1NP_998060.2 lipocalin_FABP 3..131 CDD:471979 36/93 (39%)

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