DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and fabp4a

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001004682.1 Gene:fabp4a / 447944 ZFINID:ZDB-GENE-040912-132 Length:134 Species:Danio rerio


Alignment Length:113 Identity:50/113 - (44%)
Similarity:71/113 - (62%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTL-EGDTYTLTTTSTFKTSAISFKL 66
            ||| .:|:..|:|||||||.:|||..||::||...|.:.|.: |.....:.:.|||||:.|.|||
Zfish     5 FVG-TWKMTTSDNFDEYMKAIGVGFATRQVGNRTKPNLVVCVDEQGLICMKSQSTFKTTEIKFKL 68

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELI 113
            ...|:|.|.|.|...:::|::..||.|:|..| |.:||.||.:|.:||
Zfish    69 NEPFEETTADDRKTTTVMTIENGKLVQKQTWDGKESTIEREVSDGKLI 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 50/113 (44%)
fabp4aNP_001004682.1 FABP11 4..132 CDD:381249 50/113 (44%)

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