DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and fabp7b

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_999972.1 Gene:fabp7b / 407736 ZFINID:ZDB-GENE-040614-4 Length:132 Species:Danio rerio


Alignment Length:113 Identity:54/113 - (47%)
Similarity:74/113 - (65%) Gaps:2/113 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :|.| .:||..|:|||||||.||:|..||::||...||:.::.||:...:.|.||||.:.|||.|
Zfish     4 AFCG-TWKLVSSDNFDEYMKSLGIGFATRQVGNVTKPTLVISKEGEKVVIKTQSTFKNTEISFTL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELI 113
            |.||:|.|.|.|:.||.:.|.||:|...||.| |.||.:||..|.:::
Zfish    68 GEEFEETTADDRHCKSTVLLKGNQLVHVQKWDGKETTFIREIKDGKMV 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 54/113 (48%)
fabp7bNP_999972.1 lipocalin_FABP 2..131 CDD:471979 54/113 (48%)

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