DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and FABP1

DIOPT Version :9

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001434.1 Gene:FABP1 / 2168 HGNCID:3555 Length:127 Species:Homo sapiens


Alignment Length:115 Identity:37/115 - (32%)
Similarity:58/115 - (50%) Gaps:6/115 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFK 65
            |||.| ||:|...|||:.:||.:|:.....:.|..:....|:...|..:..|.|:..|.....|.
Human     1 MSFSG-KYQLQSQENFEAFMKAIGLPEELIQKGKDIKGVSEIVQNGKHFKFTITAGSKVIQNEFT 64

  Fly    66 LGVEFDEETLDGRNVKSIITLDG-NKLTQEQKGDKPTTIVREFTDNELIT 114
            :|.|.:.||:.|..||:::.|:| |||....|..|..|.:    :.::||
Human    65 VGEECELETMTGEKVKTVVQLEGDNKLVTTFKNIKSVTEL----NGDIIT 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 Lipocalin 7..>107 CDD:278490 31/100 (31%)
FABP1NP_001434.1 Lipocalin 3..127 CDD:328776 35/113 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4015
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11955
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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