DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and lbp-7

DIOPT Version :9

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_506440.1 Gene:lbp-7 / 191701 WormBaseID:WBGene00002259 Length:137 Species:Caenorhabditis elegans


Alignment Length:111 Identity:48/111 - (43%)
Similarity:72/111 - (64%) Gaps:4/111 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLG 67
            |:| ::||.::|||||||||:||||:|||....|.|.:|:.|:|:|:.....||||.:.:|||||
 Worm     7 FIG-RWKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLG 70

  Fly    68 VEFDEETLDGRNVKSIITLDGNKLTQEQ---KGDKPTTIVREFTDN 110
            .||.|.:.|.|...|:.|.:..|||..|   |.:..::::..:.:|
 Worm    71 EEFVENSPDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLEN 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 Lipocalin 7..>107 CDD:278490 45/102 (44%)
lbp-7NP_506440.1 Lipocalin 9..>111 CDD:278490 46/102 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164739
Domainoid 1 1.000 103 1.000 Domainoid score I4253
eggNOG 1 0.900 - - E1_KOG4015
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I3481
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45877
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000407
OrthoInspector 1 1.000 - - otm14279
orthoMCL 1 0.900 - - OOG6_102739
Panther 1 1.100 - - O PTHR11955
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X240
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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