DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and fabp3

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_694493.1 Gene:fabp3 / 171478 ZFINID:ZDB-GENE-020318-2 Length:133 Species:Danio rerio


Alignment Length:116 Identity:64/116 - (55%)
Similarity:83/116 - (71%) Gaps:3/116 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :|:| .:.|.:|:|||||||.:|||..||::.|...||..::.|||.:||.|.||||::.|:|||
Zfish     4 AFIG-TWNLKESKNFDEYMKGIGVGFATRQVANMTKPTTIISKEGDVFTLKTVSTFKSTEINFKL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNEL-ITL 115
            |.||||.|.|.|.|||:|||||.||...||.| |.||::||.:||.| :||
Zfish    68 GEEFDETTADDRKVKSVITLDGGKLLHVQKWDGKETTLLREVSDNNLTLTL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 64/116 (55%)
fabp3NP_694493.1 FABP3 4..131 CDD:381241 64/116 (55%)

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