DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp2

DIOPT Version :9

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_032006.1 Gene:Fabp2 / 14079 MGIID:95478 Length:132 Species:Mus musculus


Alignment Length:117 Identity:39/117 - (33%)
Similarity:71/117 - (60%) Gaps:6/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFK 65
            |:|.| .:|:|::||::::|:::|:.::.||:|...:..:.:|.:|:.:|:..:|.|:...:.|:
Mouse     1 MAFDG-TWKVDRNENYEKFMEKMGINVMKRKLGAHDNLKLTITQDGNKFTVKESSNFRNIDVVFE 64

  Fly    66 LGVEFDEETLDGRNVKSIITLDGNKL----TQEQKGDKPTTIVREFTDNELI 113
            |||.|.....||..:....|::||||    |:...| |....|||.:.||||
Mouse    65 LGVNFPYSLADGTELTGAWTIEGNKLIGKFTRVDNG-KELIAVREVSGNELI 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 Lipocalin 7..>107 CDD:278490 31/103 (30%)
Fabp2NP_032006.1 Lipocalin 5..132 CDD:278490 37/113 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4015
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11955
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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