DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp4

DIOPT Version :9

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_006530111.1 Gene:Fabp4 / 11770 MGIID:88038 Length:149 Species:Mus musculus


Alignment Length:96 Identity:47/96 - (48%)
Similarity:62/96 - (64%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :||| .:||..|||||:||||:|||..|||:.....|.:.:::.||..|:.:.||||.:.|||||
Mouse     4 AFVG-TWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKG 97
            ||||||.|.|.|.||    :...:|.|.:.|
Mouse    68 GVEFDEITADDRKVK----VRNKELMQSEGG 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 Lipocalin 7..>107 CDD:278490 44/91 (48%)
Fabp4XP_006530111.1 lipocalin_FABP 2..>82 CDD:385686 42/78 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847219
Domainoid 1 1.000 111 1.000 Domainoid score I6227
eggNOG 1 0.900 - - E1_KOG4015
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 114 1.000 Inparanoid score I4825
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45877
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000407
OrthoInspector 1 1.000 - - otm43036
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11955
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5175
SonicParanoid 1 1.000 - - X240
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.890

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