DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and rbp2

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_002933389.1 Gene:rbp2 / 100380041 XenbaseID:XB-GENE-976675 Length:135 Species:Xenopus tropicalis


Alignment Length:92 Identity:38/92 - (41%)
Similarity:59/92 - (64%) Gaps:2/92 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEET 74
            ::|:||||.|||.|.:...|||:...|:.|.|...:|:.:...|.|||:...::|.:||||:|.|
 Frog    11 MEKNENFDGYMKALDIDFATRKIAAFLTQTKEFVQDGNNFKTKTLSTFRNYELNFTVGVEFEEHT 75

  Fly    75 --LDGRNVKSIITLDGNKLTQEQKGDK 99
              ||.|.||::::.:|:.|...|||:|
 Frog    76 KGLDNRVVKTLVSWEGDNLVCVQKGEK 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 38/92 (41%)
rbp2XP_002933389.1 lipocalin_FABP 4..134 CDD:471979 38/92 (41%)

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