DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and rbp1.2

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001108371.1 Gene:rbp1.2 / 100141334 ZFINID:ZDB-GENE-070912-18 Length:138 Species:Danio rerio


Alignment Length:94 Identity:33/94 - (35%)
Similarity:54/94 - (57%) Gaps:2/94 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDE 72
            :|:..:|||||||:.|.|.:|.||:.:.|....|:...||...:.|.:||:...:.|.:|.||:|
Zfish    10 WKMTSNENFDEYMEALDVNVVIRKIASYLILDKEIVQNGDHLYIKTLTTFRNYDMEFDVGKEFEE 74

  Fly    73 ET--LDGRNVKSIITLDGNKLTQEQKGDK 99
            :.  :|.|...:.:..:.:||...|||:|
Zfish    75 DLVGVDDRKCMTTVNWEEDKLVCVQKGEK 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 33/94 (35%)
rbp1.2NP_001108371.1 CRBP1 5..135 CDD:381237 33/94 (35%)

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