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Protein Alignment fabp and pmp2
DIOPT Version :9
Sequence 1: | NP_001027179.1 |
Gene: | fabp / 3772232 |
FlyBaseID: | FBgn0037913 |
Length: | 157 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001107544.1 |
Gene: | pmp2 / 100135411 |
XenbaseID: | XB-GENE-977969 |
Length: | 134 |
Species: | Xenopus tropicalis |
Alignment Length: | 112 |
Identity: | 57/112 - (50%) |
Similarity: | 71/112 - (63%) |
Gaps: | 2/112 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 FVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLG 67
||| .:||..|:.|||||:.||||..|||.|....|.|.:::.||...|.|.||.||:.::||||
Frog 5 FVG-TWKLTDSQGFDEYMQSLGVGFATRKAGAMAKPNVIISVNGDKILLKTESTLKTTDMTFKLG 68
Fly 68 VEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELI 113
.||||.|.|.||.|::||.|...|.|.||.| |.|||.||..:.:|:
Frog 69 EEFDETTADNRNTKTLITCDSGVLNQVQKWDGKETTIQREIKNGQLV 115
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
83 |
1.000 |
Domainoid score |
I8227 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG45877 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000407 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11955 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X240 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 7.020 |
|
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