DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33857 and Cenpa

DIOPT Version :9

Sequence 1:NP_001027373.1 Gene:His3:CG33857 / 3772231 FlyBaseID:FBgn0053857 Length:136 Species:Drosophila melanogaster
Sequence 2:XP_011239001.1 Gene:Cenpa / 12615 MGIID:88375 Length:146 Species:Mus musculus


Alignment Length:138 Identity:60/138 - (43%)
Similarity:81/138 - (58%) Gaps:21/138 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PRKQLATKAARKSAPATGGVKKPH-------------------RYRPGTVALREIRRYQKSTELL 62
            ||::..|...|.|:||.|..::..                   |.|...:.|:||:..||||:||
Mouse     3 PRRKPQTPRRRPSSPAPGPSRQSSSVGLRIERRALCVQGSQTLRRRQKFMWLKEIKTLQKSTDLL 67

  Fly    63 IRKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDI 125
            .||.||..:||||.:.|.  .|..:|:.|::|||||:||:|:.||||..|.::||.|||:.||||
Mouse    68 FRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDI 132

  Fly   126 QLARRIRG 133
            ||.|||||
Mouse   133 QLTRRIRG 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33857NP_001027373.1 PTZ00018 1..136 CDD:185400 60/138 (43%)
CenpaXP_011239001.1 H3 41..143 CDD:128705 52/100 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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