DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and CTP1

DIOPT Version :9

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_009850.1 Gene:CTP1 / 852594 SGDID:S000000495 Length:299 Species:Saccharomyces cerevisiae


Alignment Length:284 Identity:105/284 - (36%)
Similarity:158/284 - (55%) Gaps:9/284 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LKGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVL 98
            |...:||.:.|..|.|||||.|:.||:|||.:|.:....|.:. .:.||...:|...:|.|....
Yeast    13 LHSFLAGSLAGAAEACITYPFEFAKTRLQLIDKASKASRNPLV-LIYKTAKTQGIGSIYVGCPAF 76

  Fly    99 VYGSIPKSAARFGAFEFLKSNAVDSR-GQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQ 162
            :.|:..|:..||..|:.:|....||. |:||.:..::.|||||:.|::.||||.|.||...|:|:
Yeast    77 IIGNTAKAGIRFLGFDTIKDMLRDSETGELSGTRGVIAGLGAGLLESVAAVTPFEAIKTALIDDK 141

  Fly   163 RSGNPKF----RGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDL---YKGD 220
            :|..||:    ||.......:::.:|.||:|:|:.|..::|.:|||:|......:|.|   |...
Yeast   142 QSATPKYHNNGRGVVRNYSSLVRDKGFSGLYRGVLPVSMRQAANQAVRLGCYNKIKTLIQDYTDS 206

  Fly   221 DHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEGPAAFYK 285
            ...||:...:..:.||.:|..:|:...|||.||||||.|:::||.:|.:|...|.|.||...|:|
Yeast   207 PKDKPLSSGLTFLVGAFSGIVTVYSTMPLDTVKTRMQSLDSTKYSSTMNCFATIFKEEGLKTFWK 271

  Fly   286 GTVPRLGRVCLDVAITFMIYDSFM 309
            |..|||||:.|...|.|.||:..:
Yeast   272 GATPRLGRLVLSGGIVFTIYEKVL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 102/275 (37%)
Mito_carr 34..117 CDD:278578 28/82 (34%)
Mito_carr 125..220 CDD:278578 37/101 (37%)
Mito_carr 235..314 CDD:278578 35/75 (47%)
CTP1NP_009850.1 Mito_carr 8..101 CDD:395101 29/88 (33%)
Mito_carr 104..203 CDD:395101 36/98 (37%)
Mito_carr 210..298 CDD:395101 37/86 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344016
Domainoid 1 1.000 77 1.000 Domainoid score I2104
eggNOG 1 0.900 - - E1_KOG0756
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 197 1.000 Inparanoid score I877
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58666
OrthoFinder 1 1.000 - - FOG0002928
OrthoInspector 1 1.000 - - oto99712
orthoMCL 1 0.900 - - OOG6_104005
Panther 1 1.100 - - LDO PTHR45788
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1828
SonicParanoid 1 1.000 - - X3276
TreeFam 1 0.960 - -
1413.790

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