DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and mSFC1

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_195754.1 Gene:mSFC1 / 831479 AraportID:AT5G01340 Length:309 Species:Arabidopsis thaliana


Alignment Length:289 Identity:95/289 - (32%)
Similarity:145/289 - (50%) Gaps:21/289 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGS 102
            |:|.:.|.:|.|...|.:.:||:||||..||   |.||..|..|.|...|...|::||:......
plant    18 VSGSLGGVVEACCLQPIDVIKTRLQLDRVGA---YKGIAHCGSKVVRTEGVRALWKGLTPFATHL 79

  Fly   103 IPKSAARFGAFEFLKSNAVDSR-GQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQRSGN 166
            ..|...|.|:....::...||. |::||.|:.|.|.||||.||:..|||.|.:|:: :..|:..:
plant    80 TLKYTLRMGSNAMFQTAFKDSETGKVSNRGRFLSGFGAGVLEALAIVTPFEVVKIR-LQQQKGLS 143

  Fly   167 P---KFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLES----LKDLYKGDDH-T 223
            |   |::|..|....|::.|.|.|::.|..||:::.|:|||:.|....:    |.:.::||.. .
plant   144 PELFKYKGPIHCARTIVREESILGLWSGAAPTVMRNGTNQAVMFTAKNAFDILLWNKHEGDGKIL 208

  Fly   224 KPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEAS-----KYKNTAHCAVEILKNEGPAAF 283
            :|...::.|.   :||.|..|...|.||||||:......     :||...|....|...||..|.
plant   209 QPWQSMISGF---LAGTAGPFCTGPFDVVKTRLMAQSRDSEGGIRYKGMVHAIRTIYAEEGLVAL 270

  Fly   284 YKGTVPRLGRVCLDVAITFMIYDSFMDLF 312
            ::|.:|||.|:....||.:.:.|....|:
plant   271 WRGLLPRLMRIPPGQAIMWAVADQVTGLY 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 27/78 (35%)
Mito_carr 125..220 CDD:395101 35/101 (35%)
Mito_carr 235..314 CDD:395101 27/83 (33%)
mSFC1NP_195754.1 Mito_carr 9..>74 CDD:395101 24/58 (41%)
Mito_carr 103..200 CDD:395101 35/97 (36%)
Mito_carr 210..295 CDD:395101 28/87 (32%)

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