DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sea and SLC25A22

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001412263.1 Gene:SLC25A22 / 79751 HGNCID:19954 Length:348 Species:Homo sapiens


Alignment Length:322 Identity:96/322 - (29%)
Similarity:141/322 - (43%) Gaps:72/322 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QVGLKG-IVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGI------------------- 75
            |:.|.. ::.|||.|.|.:...:|.:..||:||..:.| .:.|..|                   
Human     5 QISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNG-QRVYTSIPRQSRDPGLRLAPAGPGSP 68

  Fly    76 ------FDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSG--- 131
                  .||:.|||...|:.|:|||.:|.:....|:.|.:..|.:|.       |.|||..|   
Human    69 CPLGHRSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFF-------RHQLSKDGQKL 126

  Fly   132 ----KLLCGLGAGVCEAIVAVTPMETIKVKF-----INDQR-----SGNPKFRGFAHG------- 175
                ::|.|.|||.|:.|| .||||.:|::.     |..||     .|....:|.|..       
Human   127 TLLKEMLAGCGAGTCQVIV-TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAA 190

  Fly   176 --------VGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGDDHTKPVPKLVVG 232
                    ...:::|.||:|:||||..|:|:......:.|.:..:|..|.:.....|. |..|..
Human   191 PRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKS-PFYVSF 254

  Fly   233 VFGAIAGAASVFGNTPLDVVKTRMQ----GLEASKYKNTAHCAVEILKNEGPAAFYKGTVPR 290
            :.|.:||:|:.....|.||||||:|    |:....|.....||.:||::|||:||.||...|
Human   255 LAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 29/108 (27%)
Mito_carr 125..220 CDD:395101 36/126 (29%)
Mito_carr 235..314 CDD:395101 26/60 (43%)
SLC25A22NP_001412263.1 PTZ00169 3..314 CDD:240302 95/318 (30%)
Mito_carr 4..123 CDD:395101 34/125 (27%)

Return to query results.
Submit another query.