DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sea and slc25a47a

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001038779.1 Gene:slc25a47a / 724009 ZFINID:ZDB-GENE-060616-266 Length:294 Species:Danio rerio


Alignment Length:286 Identity:73/286 - (25%)
Similarity:133/286 - (46%) Gaps:28/286 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGS 102
            :||...|...:.:.||.:.||.::|     ..|::.||:.|:..|:.:.|..|.::|:.:.:...
Zfish     7 LAGSFGGACGVAVGYPLDTVKVRIQ-----TQKQFTGIWQCIVLTIRKEGVHGFFKGMFLPITTI 66

  Fly   103 IPKSAARFGAF-EFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKF-------- 158
            ...|:..||.: ..|::.:...:.:.:.....:.||..||.:..| ::|.:.:||:.        
Zfish    67 SMTSSVVFGTYRNCLQA
LSYIRKAENTKLDVFMSGLAGGVAQVSV-MSPGDIVKVRLQCQTESRH 130

  Fly   159 -INDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGDDH 222
             :|.:.|..||:.|..|.:..|.:.:|:||:|:|..|..|:.|.:.|..|....:|......|..
Zfish   131 SVNPKYSVKPKYSGPIHCLLSICREQGLSGLYRGALPLALRDGPSFATYFLTYHTLCARLTPDGQ 195

  Fly   223 TKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQ--GLEAS-KYKNTAHCAVEILKNEGPAAFY 284
            .:| ...||.:.|.:||.:.....||:||:|.|:|  |:... :|:...||.....:.||...|:
Zfish   196 KEP-EWTVVLLSGGVAGMSGWAVGTPMDVIKARLQMDGVRGQRRYRGLLHCLTVTTRTEGLGVFF 259

  Fly   285 KGTVPRLGRVCLDV----AITFMIYD 306
            :.    ||..||..    .:.|.:|:
Zfish   260 RS----LGINCLRAFPVNMVVFAVYE 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 19/79 (24%)
Mito_carr 125..220 CDD:395101 26/103 (25%)
Mito_carr 235..314 CDD:395101 23/79 (29%)
slc25a47aNP_001038779.1 Mito_carr 3..77 CDD:395101 19/74 (26%)
Solcar 1 4..83 20/80 (25%)
Solcar 2 95..189 26/94 (28%)
Mito_carr 98..183 CDD:395101 25/85 (29%)
Mito_carr 196..288 CDD:395101 26/91 (29%)
Solcar 3 198..286 26/89 (29%)

Return to query results.
Submit another query.