DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sea and slc25a24

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001011047.1 Gene:slc25a24 / 496457 XenbaseID:XB-GENE-976243 Length:473 Species:Xenopus tropicalis


Alignment Length:279 Identity:74/279 - (26%)
Similarity:127/279 - (45%) Gaps:16/279 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KGIVAGGITGGIEICITYPTEYVKTQLQL-DEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVL 98
            |.::|||:.|.:....|.|.:.:|..:|: ..||.|....|:    |:.|.|.|...|:||..|.
 Frog   196 KQLLAGGMAGAVSRTGTAPLDRLKVMMQVHGSKGNANIITGL----KQMVKEGGIRSLWRGNGVN 256

  Fly    99 VYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFINDQR 163
            |....|::|.:|.|:|..|.......|:|..:.:.:.|..|| ..|..::.|||.:|.:....:.
 Frog   257 VIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAG-ATAQTSIYPMEVLKTRLAVGKT 320

  Fly   164 SGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLY---KGDDHTKP 225
            .   ::.|......:|::.||:...|||..|.||.......|...:.|:||..:   ...|...|
 Frog   321 G---QYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANP 382

  Fly   226 VPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQ---GLEASKYKNTAHCAVEILKNEGPAAFYKGT 287
            ...:::|. |..:.......:.||.:::||||   .:|.:...|......:|:..||....|:|.
 Frog   383 GVLVLLGC-GTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGLFRKIVAKEGFFGLYRGI 446

  Fly   288 VPRLGRVCLDVAITFMIYD 306
            .|...:|...|:|::::|:
 Frog   447 APNFLKVLPAVSISYVVYE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 27/82 (33%)
Mito_carr 125..220 CDD:395101 24/97 (25%)
Mito_carr 235..314 CDD:395101 19/75 (25%)
slc25a24NP_001011047.1 Regulatory N-terminal domain. /evidence=ECO:0000250|UniProtKB:Q6NUK1 1..173
FRQ1 22..151 CDD:444056
Linker region. /evidence=ECO:0000250|UniProtKB:Q6NUK1 159..168
C-terminal transmembrane transporter domain. /evidence=ECO:0000250|UniProtKB:Q6NUK1 174..473 74/279 (27%)
PTZ00169 199..452 CDD:240302 69/261 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.