DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and aralar1

DIOPT Version :9

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001247368.1 Gene:aralar1 / 43616 FlyBaseID:FBgn0028646 Length:707 Species:Drosophila melanogaster


Alignment Length:320 Identity:90/320 - (28%)
Similarity:140/320 - (43%) Gaps:40/320 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRSAFAS-LVSPYRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICITYPTEYVKTQLQLDE 65
            |||||.. |.|.||                      ...|...|.:...:.||.:.|||::|...
  Fly   344 DRSAFIQVLESSYR----------------------FTLGSFAGAVGATVVYPIDLVKTRMQNQR 386

  Fly    66 KGA---AKKYNGIFDCVKKTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQL 127
            .|:   ...|...:||.||.|...||:||||||...:.|..|:.|.:....:.::....|.:|.:
  Fly   387 AGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMGVAPEKAIKLTVNDLVRDKLTDKKGNI 451

  Fly   128 SNSGKLLCGLGAGVCEAIVAVTPMETIKVKF-INDQRSGNPKFRGFAHGVGQIIKSEGISGIYKG 191
            ....::|.|..||..: :|...|:|.:|::. :..:.:...|.|.::     :::..|:.|:|||
  Fly   452 PTWAEVLAGGCAGASQ-VVFTNPLEIVKIRLQVAGEIASGSKIRAWS-----VVRELGLFGLYKG 510

  Fly   192 LTPTILKQGSNQAIRFFVLESLKDLYKG-DDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTR 255
            ....:|:.....||.|......|.:... |.:..|:..|..   |||||..:....||.||:|||
  Fly   511 ARACLLRDVPFSAIYFPTYAHTKAMMADKDGYNHPLTLLAA---GAIAGVPAASLVTPADVIKTR 572

  Fly   256 MQGLEAS---KYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLF 312
            :|.:..|   .|........:|:..|||.||:|||..|:.|......:|.:.|:....||
  Fly   573 LQVVARSGQTTYTGVWDATKKIMAEEGPRAFWKGTAARVFRSSPQFGVTLVTYELLQRLF 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 77/275 (28%)
Mito_carr 34..117 CDD:278578 26/85 (31%)
Mito_carr 125..220 CDD:278578 21/96 (22%)
Mito_carr 235..314 CDD:278578 30/81 (37%)
aralar1NP_001247368.1 EF-hand_7 35..99 CDD:290234
EF-hand_8 51..99 CDD:290545
EF-hand_7 81..134 CDD:290234
EFh 84..135 CDD:298682
EF-hand_7 111..173 CDD:290234
Mito_carr 350..448 CDD:278578 31/119 (26%)
PTZ00169 358..631 CDD:240302 79/281 (28%)
Mito_carr 449..539 CDD:278578 21/95 (22%)
Mito_carr 544..633 CDD:278578 32/92 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441999
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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