Protein Alignment sea and GC1

DIOPT Version :9

• Sequence 1: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Sequence 2: NP_001262490.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 86/280 - (30%)
• Similarity: 139/280 - (49%)
• Gaps: 30/280 - (10%)

  Fly    34 LKGIVAGGITGGIEICITYPTEYVKTQLQLDEKG--AAKKYNGIFDCVKKTVGERGFLGLYRGLS 96
            |..|:.|||.|.|.:...:|.:.|||:||..:.|  ..:.||.:|||.:||....|:.|:|||..
  Fly    22 LPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSG 86

  Fly    97 VLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFIND 161
            |.:....|:.|.:..|.::.:.......|:|..:.:::.|..||..: |:..||||.:|::..:.
  Fly    87 VNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQ-IIVTTPMELLKIQMQDA 150

  Fly   162 QR-SGNPKFRG-------FAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDL-- 216
            .| :...|..|       ......|:||.:||.|:|||:..|.|:..:...|.|.:..:|.||
  Fly   151 GRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGP 215

  Fly   217 YKGDDHTKPVPKLVVGVF------GAIAGAASVFGNTPLDVVKTRMQGLEAS----KYKNTAHCA 271
            .:.|...:       .||      |..||:.:.....|.||||||:|.::.:    ::|..:.|.
  Fly   216 RRNDGSGE-------AVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCI 273

  Fly   272 VEILKNEGPAAFYKGTVPRL 291
            .:.||:|||.||:||.:.|:
  Fly   274 TKTLKHEGPTAFFKGGLCRM 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	86/280 (31%)
		Mito_carr	34..117	CDD:278578	30/84 (36%)
		Mito_carr	125..220	CDD:278578	30/104 (29%)
		Mito_carr	235..314	CDD:278578	23/61 (38%)
GC1	NP_001262490.1	Mito_carr	36..113	CDD:278578	23/76 (30%)
		Mito_carr	115..213	CDD:278578	28/98 (29%)
		Mito_carr	226..307	CDD:278578	24/68 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442072
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840