DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment sea and Rim2

DIOPT Version :9

Sequence 1:	NP_001027175.1	Gene:	sea / 3772221	FlyBaseID:	FBgn0037912	Length:	317	Species:	Drosophila melanogaster
Sequence 2:	NP_608615.1	Gene:	Rim2 / 33350	FlyBaseID:	FBgn0031359	Length:	365	Species:	Drosophila melanogaster

Alignment Length:	189	Identity:	48/189 - (25%)
Similarity:	85/189 - (44%)	Gaps:	24/189 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    37 IVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNG-----IFDCVKKTVGERGFLGLYRGLS 96
            |::....|.:....|.|..:|||::|||       ||.     :..|:::...:.|....|:|::
  Fly   171 IMSAASAGFVSSTATNPIWFVKTRMQLD-------YNSKVQMTVRQCIERVYAQGGVAAFYKGIT 228

  Fly    97 VLVYGSIPKSAARFGAFEFLKSNAVDSRGQ----LSNSGKLLCGLGAGVCEAIVA---VTPMETI 154
            ...:| |.::...|..:||:||..::.|.|    ...|...|..:.||.....:|   ..|.|..
  Fly   229 ASYFG-ICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVA 292

  Fly   155 KVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESL 213
            :.:.   :..|| |:..|...:..:.|.||.:|:|:||...:::|..|.||.....|::
  Fly   293 RTRL---REEGN-KYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAV 347

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	48/189 (25%)
		Mito_carr	34..117	CDD:278578	21/84 (25%)
		Mito_carr	125..220	CDD:278578	24/96 (25%)
		Mito_carr	235..314	CDD:278578
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578
		Mito_carr	163..253	CDD:278578	23/89 (26%)
		Mito_carr	268..355	CDD:278578	22/84 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442081
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840