DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and Slc25a1

DIOPT Version :9

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_059003.1 Gene:Slc25a1 / 29743 RGDID:3703 Length:311 Species:Rattus norvegicus


Alignment Length:297 Identity:199/297 - (67%)
Similarity:239/297 - (80%) Gaps:4/297 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AAAADSGQVGL----KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVG 84
            |||..||:..|    |.|:|||:.||||||||:|||||||||||||:....:|.||.|||::||.
  Rat    12 AAAPGSGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVRQTVR 76

  Fly    85 ERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVT 149
            ..|.||||||||.|:||||||:|.|||.||||.::..|::|:|.:...|||||||||.||:|.|.
  Rat    77 SHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSRRGLLCGLGAGVAEAVVVVC 141

  Fly   150 PMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLK 214
            ||||:|||||:||.|.|||:|||.|||.:|::.:|:.|.|:|||.|:|||||||||||||:.||:
  Rat   142 PMETVKVKFIHDQTSSNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLR 206

  Fly   215 DLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEG 279
            :.|:||:..||:..|:.|||||:||||||||||||||:|||||||||.||:||..|.|:||||||
  Rat   207 NWYQGDNPNKPMNPLITGVFGAVAGAASVFGNTPLDVIKTRMQGLEAHKYRNTLDCGVQILKNEG 271

  Fly   280 PAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVW 316
            |.|||||||||||||||||||.|:|||..:.|.||||
  Rat   272 PKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVW 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 185/271 (68%)
Mito_carr 34..117 CDD:278578 58/86 (67%)
Mito_carr 125..220 CDD:278578 60/94 (64%)
Mito_carr 235..314 CDD:278578 62/78 (79%)
Slc25a1NP_059003.1 Solcar 1 23..111 58/87 (67%)
Mito_carr 24..114 CDD:278578 58/89 (65%)
PTZ00169 30..304 CDD:240302 186/273 (68%)
Solcar 2 122..208 57/85 (67%)
Mito_carr <141..213 CDD:278578 46/71 (65%)
Mito_carr 216..306 CDD:278578 68/89 (76%)
Solcar 3 218..303 65/84 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4699
eggNOG 1 0.900 - - E1_KOG0756
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4362
Inparanoid 1 1.050 408 1.000 Inparanoid score I1825
OMA 1 1.010 - - QHG58666
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002928
OrthoInspector 1 1.000 - - oto97319
orthoMCL 1 0.900 - - OOG6_104005
Panther 1 1.100 - - LDO PTHR45788
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3276
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

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