DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and Slc25a1

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_059003.1 Gene:Slc25a1 / 29743 RGDID:3703 Length:311 Species:Rattus norvegicus


Alignment Length:297 Identity:199/297 - (67%)
Similarity:239/297 - (80%) Gaps:4/297 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AAAADSGQVGL----KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVG 84
            |||..||:..|    |.|:|||:.||||||||:|||||||||||||:....:|.||.|||::||.
  Rat    12 AAAPGSGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVRQTVR 76

  Fly    85 ERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVT 149
            ..|.||||||||.|:||||||:|.|||.||||.::..|::|:|.:...|||||||||.||:|.|.
  Rat    77 SHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSRRGLLCGLGAGVAEAVVVVC 141

  Fly   150 PMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLK 214
            ||||:|||||:||.|.|||:|||.|||.:|::.:|:.|.|:|||.|:|||||||||||||:.||:
  Rat   142 PMETVKVKFIHDQTSSNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLR 206

  Fly   215 DLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEG 279
            :.|:||:..||:..|:.|||||:||||||||||||||:|||||||||.||:||..|.|:||||||
  Rat   207 NWYQGDNPNKPMNPLITGVFGAVAGAASVFGNTPLDVIKTRMQGLEAHKYRNTLDCGVQILKNEG 271

  Fly   280 PAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVW 316
            |.|||||||||||||||||||.|:|||..:.|.||||
  Rat   272 PKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVW 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 58/86 (67%)
Mito_carr 125..220 CDD:395101 60/94 (64%)
Mito_carr 235..314 CDD:395101 62/78 (79%)
Slc25a1NP_059003.1 Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 23..111 58/87 (67%)
Mito_carr 24..114 CDD:395101 58/89 (65%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 122..208 57/85 (67%)
Mito_carr <141..213 CDD:395101 46/71 (65%)
Mito_carr 216..306 CDD:395101 68/89 (76%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 218..303 65/84 (77%)

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