DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and SPAC19G12.05

DIOPT Version :9

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_594420.1 Gene:SPAC19G12.05 / 2542456 PomBaseID:SPAC19G12.05 Length:291 Species:Schizosaccharomyces pombe


Alignment Length:285 Identity:109/285 - (38%)
Similarity:162/285 - (56%) Gaps:22/285 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LKGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGL--YRGLS 96
            :|.|:|||:.|.|||.||||.|:.||:|||            :..|:.|..:....||  |||.|
pombe    18 VKSIIAGGVAGAIEISITYPAEFAKTRLQL------------YRNVEGTKAKLPPFGLEWYRGCS 70

  Fly    97 VLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTPMETIKVKFIND 161
            .::.|:..|:|.||.||:.:|.:..|..|.|:....:|.||||||.|:::.:||.|:||...|:|
pombe    71 TVIVGNSLKAAVRFFAFDSIKKSLSDEHGHLTGPRTVLAGLGAGVAESVLVLTPFESIKTAIIDD 135

  Fly   162 QRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKG----DDH 222
            ::..||:.:||......|:...||.|:|:||..|:.:|.:|..:||....|:|...:.    |:.
pombe   136 RKRPNPRLKGFLQASRIIVHENGIRGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEK 200

  Fly   223 TKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASK-YKNTAHCAVEILKNEGPAAFYKG 286
            ...|...:|   |::||..:|:...|:|.||:|||.|.||| |||:.|||.:||..:|...|:.|
pombe   201 LSTVTTFLV---GSVAGIITVYCTQPIDTVKSRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSG 262

  Fly   287 TVPRLGRVCLDVAITFMIYDSFMDL 311
            ..|||.|:.|...|.|.:|:..|::
pombe   263 ATPRLARLILSGGIVFTVYEKVMEI 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 106/274 (39%)
Mito_carr 34..117 CDD:278578 34/84 (40%)
Mito_carr 125..220 CDD:278578 35/98 (36%)
Mito_carr 235..314 CDD:278578 35/78 (45%)
SPAC19G12.05NP_594420.1 Mito_carr 13..96 CDD:278578 35/89 (39%)
PTZ00168 19..278 CDD:185494 106/273 (39%)
Mito_carr 99..195 CDD:278578 35/95 (37%)
Mito_carr 199..288 CDD:278578 37/92 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I2443
eggNOG 1 0.900 - - E1_KOG0756
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4362
Inparanoid 1 1.050 195 1.000 Inparanoid score I1021
OMA 1 1.010 - - QHG58666
OrthoFinder 1 1.000 - - FOG0002928
OrthoInspector 1 1.000 - - oto101371
orthoMCL 1 0.900 - - OOG6_104005
Panther 1 1.100 - - LDO PTHR45788
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1828
SonicParanoid 1 1.000 - - X3276
TreeFam 1 0.960 - -
1413.860

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