DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and SLC25A52

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001029344.4 Gene:SLC25A52 / 147407 HGNCID:23324 Length:297 Species:Homo sapiens


Alignment Length:300 Identity:68/300 - (22%)
Similarity:107/300 - (35%) Gaps:87/300 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LKGIVAGGITGGIEICITYPTEYV---------KTQ---LQLDEKGAAKKYNGIF-DCVKKTVGE 85
            :|..:.|.......:.||||.:.|         ||:   |||...|....|.||. ..::||...
Human    31 MKHYLCGCCAAFNNVAITYPIQKVLFRQQLYGIKTRDAVLQLRRDGFRNLYRGILPPLMQKTTTL 95

  Fly    86 RGFLGLYRGLSVLVYGSI--PKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAV 148
            ....|||..||.|:...:  |:.|.. |....|                      ||..|||  .
Human    96 ALMFGLYEDLSCLLRKHVRAPEFATH-GVAAVL----------------------AGTAEAI--F 135

  Fly   149 TPMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESL 213
            ||:|.::....|.:.  :.||.. .:...:.:|..||...|:||.|.:.:.|.:..:.|.:...:
Human   136 TPLERVQTLLQNHKH--HDKFTN-TYQAFKALKCHGIGEYYRGLVPILFRNGLSNVLFFGLRGPI 197

  Fly   214 KD-LYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKN 277
            |: |.....|:..:....:|  |.:.||...|...|::|||||:|.....:::            
Human   198 KEHLPTATTHSAHLVNDFIG--GGLLGAMLGFLCFPINVVKTRLQSQIGGEFQ------------ 248

  Fly   278 EGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVWV 317
                                         ||..:|.|:|:
Human   249 -----------------------------SFPKVFQKIWL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 27/97 (28%)
Mito_carr 125..220 CDD:395101 22/95 (23%)
Mito_carr 235..314 CDD:395101 14/78 (18%)
SLC25A52NP_001029344.4 Solcar 1. /evidence=ECO:0000255 28..108 23/76 (30%)
Mito_carr 31..112 CDD:395101 24/80 (30%)
Solcar 2. /evidence=ECO:0000255 116..200 25/111 (23%)
Mito_carr 118..203 CDD:395101 25/112 (22%)
Solcar 3. /evidence=ECO:0000255 209..296 17/93 (18%)
Mito_carr <229..297 CDD:395101 12/71 (17%)

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