DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sea and Slc25a1

DIOPT Version :9

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_694790.1 Gene:Slc25a1 / 13358 MGIID:1345283 Length:311 Species:Mus musculus


Alignment Length:297 Identity:201/297 - (67%)
Similarity:239/297 - (80%) Gaps:4/297 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AAAADSGQVGL----KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVG 84
            |||..||:..|    |.|:|||:.||||||||:|||||||||||||:....:|.||.|||::||.
Mouse    12 AAAPGSGKPKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVRQTVR 76

  Fly    85 ERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVT 149
            ..|.||||||||.|:||||||:|.|||.||||.::..|::|:|.:...|||||||||.||:|.|.
Mouse    77 SHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSRRGLLCGLGAGVAEAVVVVC 141

  Fly   150 PMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLK 214
            ||||||||||:||.|.|||:|||.|||.:||:.:|:.|.|:|||.|:|||||||||||||:.||:
Mouse   142 PMETIKVKFIHDQTSSNPKYRGFFHGVREIIREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLR 206

  Fly   215 DLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKNTAHCAVEILKNEG 279
            :.|:||:|.||:..|:.|||||.||||||||||||||:|||||||||.||:||..|.::||||||
Mouse   207 NWYQGDNHNKPMNPLITGVFGATAGAASVFGNTPLDVIKTRMQGLEAHKYRNTLDCGLKILKNEG 271

  Fly   280 PAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNKVW 316
            |.|||||||||||||||||||.|:|||..:.|.||||
Mouse   272 PKAFYKGTVPRLGRVCLDVAIVFIIYDEVVKLLNKVW 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 187/271 (69%)
Mito_carr 34..117 CDD:278578 58/86 (67%)
Mito_carr 125..220 CDD:278578 62/94 (66%)
Mito_carr 235..314 CDD:278578 61/78 (78%)
Slc25a1NP_694790.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/8 (63%)
Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 23..111 58/87 (67%)
Mito_carr 24..114 CDD:278578 58/89 (65%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 122..208 59/85 (69%)
Mito_carr <141..213 CDD:278578 48/71 (68%)
Mito_carr 216..306 CDD:278578 67/89 (75%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 218..303 64/84 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 136 1.000 Domainoid score I4943
eggNOG 1 0.900 - - E1_KOG0756
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4362
Inparanoid 1 1.050 408 1.000 Inparanoid score I1856
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58666
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002928
OrthoInspector 1 1.000 - - oto93777
orthoMCL 1 0.900 - - OOG6_104005
Panther 1 1.100 - - LDO PTHR45788
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1828
SonicParanoid 1 1.000 - - X3276
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.860

Return to query results.
Submit another query.