DRSC/TRiP Functional Genomics Resources

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Protein Alignment sea and ucp3

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_002942565.1 Gene:ucp3 / 100495495 XenbaseID:XB-GENE-6464668 Length:309 Species:Xenopus tropicalis


Alignment Length:289 Identity:84/289 - (29%)
Similarity:123/289 - (42%) Gaps:37/289 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VGLK----------GIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKK------YNGIFDCVK 80
            ||||          ..|..|....|....|:|.:..|.:||:..:|.:.|      |.|:|..:|
 Frog     2 VGLKPTEVPPTPLVKFVGAGTAACIADLFTFPLDTAKVRLQIQGEGTSVKDTKVLRYKGVFGTIK 66

  Fly    81 KTVGERGFLGLYRGLSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAI 145
            ..|...|...||.||...:...:..::.|.|.::.:|....    :.|.|..:.|.|.||.....
 Frog    67 TMVKTEGATSLYNGLVAGLQRQMSFASIRIGLYDSVKQFYC----RQSESSGVACRLLAGCTTGA 127

  Fly   146 VAVT---PMETIKVKF-----INDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSN 202
            :|||   |.:.:||:|     :.|   |..::.|.......|.|.||:.|::||....|.:....
 Frog   128 MAVTLAQPTDVVKVRFQAHIKVMD---GERRYNGTVDAYKTIAKEEGLRGLWKGTIANITRNAIV 189

  Fly   203 QAIRFFVLESLKDLYKGDD-HTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLEASKYKN 266
            ........:.:|:...... .|..:|...|..||  ||..:....:|:||||||.....|.:|||
 Frog   190 NCAELVTYDLIKETILNQRLMTDNLPCHFVAAFG--AGFCATVVASPVDVVKTRYMNSPAGQYKN 252

  Fly   267 TAHCAVEILKNEGPAAFYKGTVP---RLG 292
            ..:||..:|..||..|||||.:|   |||
 Frog   253 ALNCAFIMLVKEGSVAFYKGFMPAFLRLG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 24/98 (24%)
Mito_carr 125..220 CDD:395101 25/102 (25%)
Mito_carr 235..314 CDD:395101 28/61 (46%)
ucp3XP_002942565.1 PTZ00169 14..299 CDD:240302 80/277 (29%)
Mito_carr 111..206 CDD:395101 24/97 (25%)

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