DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sea and slc25a53

DIOPT Version :10

Sequence 1:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_002940455.1 Gene:slc25a53 / 100489481 XenbaseID:XB-GENE-6045975 Length:283 Species:Xenopus tropicalis


Alignment Length:231 Identity:64/231 - (27%)
Similarity:103/231 - (44%) Gaps:19/231 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ERGFLGLYRGLSVLVYGSIPKSAARFGA-FEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAV 148
            :.||..|||||:..:.....:....||. ..|.||  :...|::.:..:.|.||.:|..||::.|
 Frog    57 KEGFAHLYRGLAPPLVAKTVQGTLLFGTQATFQKS--LSGNGKVGHWDRCLSGLMSGALEAVLLV 119

  Fly   149 TPMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGIS-----GIYKGLTPTILKQGSNQAIRFF 208
             |.|.|: ..:.|.|: |.:|.. |:.:.|..:|....     |:|:|.:..:.:.....|:.|.
 Frog   120 -PFERIQ-NILQDGRN-NARFPS-ANSILQEFQSYSTQNRFTFGLYRGFSVILARNALGSALYFS 180

  Fly   209 VLESLKDLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQ---GLEASKYKNTAHC 270
            ..|.|:|....|.....||.|   |.|::.||.:.....||.|:.:.||   |.|..|.:..|. 
 Frog   181 FKEPLRDALSLDGVPGWVPSL---VSGSVNGALTSLILYPLSVLVSNMQAGVGKELPKTREVAR- 241

  Fly   271 AVEILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYD 306
            ||.:......:..|:|....:.|.|:...:|..|:|
 Frog   242 AVWLQCGGNVSLLYRGASLIILRSCITWGVTTAIHD 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 10/32 (31%)
Mito_carr 125..220 CDD:395101 26/99 (26%)
Mito_carr 235..314 CDD:395101 21/75 (28%)
slc25a53XP_002940455.1 Mito_carr 20..96 CDD:395101 12/40 (30%)
Mito_carr 96..193 CDD:395101 26/100 (26%)
Mito_carr 193..280 CDD:395101 25/89 (28%)

Return to query results.
Submit another query.