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Protein Alignment GatC and gatc
DIOPT Version :9
Sequence 1: | NP_001027263.1 |
Gene: | GatC / 3772218 |
FlyBaseID: | FBgn0064115 |
Length: | 148 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001288258.1 |
Gene: | gatc / 558898 |
ZFINID: | ZDB-GENE-060526-381 |
Length: | 184 |
Species: | Danio rerio |
Alignment Length: | 147 |
Identity: | 59/147 - (40%) |
Similarity: | 88/147 - (59%) |
Gaps: | 18/147 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 ATKSNEKATKLDFKQLTH---------PTKVPQTP-----VDSKFPDTSASEIQIDTKTIQLLER 64
|..::..|.:..:.:.|| ..|||||| .:|:.|..: :|....:..|||
Zfish 27 ALSASLSANRTSWSRWTHMRDSSNAAWTPKVPQTPTWEPVAESQLPPAT----RISPDLVDKLER 87
Fly 65 LSLVDLDSERALATLKSSIQFADKIAHINTEHVRPLYTVLEHQQLQLRNDQVTEGDCRAEVLRNA 129
|:|||..||..:..|:.:|:|||::..|||:.|.|:.:|||.::|.||:|.||||:|..|:|:.|
Zfish 88 LALVDFGSEEGVDCLEKAIRFADQLHVINTDGVEPMDSVLEDRELYLRDDTVTEGECAEELLQLA 152
Fly 130 KVTDEDYFVSPPGNIPL 146
|.|.|:||::|||||||
Zfish 153 KHTVEEYFLAPPGNIPL 169
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GatC | NP_001027263.1 |
gatC |
53..140 |
CDD:178810 |
40/86 (47%) |
gatc | NP_001288258.1 |
gatC |
76..163 |
CDD:178810 |
40/86 (47%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170584255 |
Domainoid |
1 |
1.000 |
62 |
1.000 |
Domainoid score |
I10384 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4247 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H19922 |
Inparanoid |
1 |
1.050 |
101 |
1.000 |
Inparanoid score |
I4985 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0007313 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto40987 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_107942 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15004 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2535 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X5423 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
14 | 13.780 |
|
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