DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatC and Gatc

DIOPT Version :10

Sequence 1:NP_001027263.1 Gene:GatC / 3772218 FlyBaseID:FBgn0064115 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001101809.1 Gene:Gatc / 360821 RGDID:1309698 Length:155 Species:Rattus norvegicus


Alignment Length:117 Identity:46/117 - (39%)
Similarity:73/117 - (62%) Gaps:6/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PQTPVDSKFPDTSASEI------QIDTKTIQLLERLSLVDLDSERALATLKSSIQFADKIAHINT 94
            |:..|.:..|.|.|..:      ::....::.||||:||:..|..|:..|:.::.|||::..::|
  Rat    26 PRGKVQAADPKTQAPRLVPEGTDRVSAAVVEHLERLALVNFSSREAVDRLEKAVAFADQLHAVDT 90

  Fly    95 EHVRPLYTVLEHQQLQLRNDQVTEGDCRAEVLRNAKVTDEDYFVSPPGNIPL 146
            :.|.||.:|||.:.|.||:|:|.||.|..|:|:|:....|:|||:|||||||
  Rat    91 DGVEPLESVLEDRCLYLRSDKVAEGGCAEELLQNSNHVVEEYFVAPPGNIPL 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatCNP_001027263.1 gatC 53..140 CDD:178810 34/86 (40%)
GatcNP_001101809.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..42 5/15 (33%)
gatC 50..136 CDD:469792 34/85 (40%)

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