DRSC/TRiP Functional Genomics Resources

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Protein Alignment His3:CG33818 and RGD1564548

DIOPT Version :9

Sequence 1:NP_001027308.1 Gene:His3:CG33818 / 3772198 FlyBaseID:FBgn0053818 Length:136 Species:Drosophila melanogaster
Sequence 2:XP_038936142.1 Gene:RGD1564548 / 500882 RGDID:1564548 Length:136 Species:Rattus norvegicus


Alignment Length:135 Identity:117/135 - (86%)
Similarity:124/135 - (91%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 65
            ||||||||||||...||||||||||:.||||:|||||||||||||||||||||.|||||||||||
  Rat     1 MARTKQTARKSTSDTAPRKQLATKASCKSAPSTGGVKKPHRYRPGTVALREIRCYQKSTELLIRK 65

  Fly    66 LPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
            |||||||||:||||||||||||:|:.||||||||.||||||||||||:|.|.|||..|:||||||
  Rat    66 LPFQRLVREMAQDFKTDLRFQSAAIGALQEASEACLVGLFEDTNLCAVHTKHVTIRSKNIQLARR 130

  Fly   131 IRGER 135
            |||||
  Rat   131 IRGER 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His3:CG33818NP_001027308.1 PTZ00018 1..136 CDD:185400 117/135 (87%)
RGD1564548XP_038936142.1 PTZ00018 1..135 CDD:185400 115/133 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54047
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000188
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100119
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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