DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and FAR6

DIOPT Version :10

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001326776.1 Gene:FAR6 / 824837 AraportID:AT3G56700 Length:548 Species:Arabidopsis thaliana


Alignment Length:496 Identity:131/496 - (26%)
Similarity:224/496 - (45%) Gaps:77/496 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FYKDKTVFLTGGSGFLGKVTIAKLLC-TTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGNLMK- 70
            |.:.|:..:||.:|||.||.|.|||. :.|:.:|::|:|:|..:...:|  .:| :.:..:|.| 
plant    80 FLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKR--LYD-EIISSDLFKL 141

  Fly    71 ------TNPEAL--KRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAV 127
                  ::.||.  ::::|..||.:|.:||:.:....::.:|:.::|.......|.:....||:|
plant   142 LKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIKSEIANMISEEIDVIISCGGRTTFDDRYDSALSV 206

  Fly   128 NTRATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLD 192
            |......::...|....|:.|:|.||||    |....|....|...|..|.|...| :|..||  
plant   207 NALGPGRLLSFGKGCRKLKLFLHFSTAY----VTGKREGTVLETPLCIGENITSDL-NIKSEL-- 264

  Fly   193 KMAPALMGKY----------------------PNTYTYTKALTEQVIQKEAKDLPLSIFRPGVII 235
            |:|...:.|:                      .|:||:|||:.|.||..:..:||:.|.||.:|.
plant   265 KLASEAVRKFRGREEIKKLKELGFERAQHYGWENSYTFTKAIGEAVIHSKRGNLPVVIIRPSIIE 329

  Fly   236 ASYKEPMPGWID--NLYGPIAVLYGAAFGILHITLLNLKAQAGIVPVDYCVNMVLT------CAW 292
            :||.||.||||.  .:..||.:.|  |.|.:.....:.::...|:|||...|..:.      |. 
plant   330 SSYNEPFPGWIQGTRMADPIILAY--AKGQISDFWADPQSLMDIIPVDMVANAAIAAMAKHGCG- 391

  Fly   293 NTARDTSIKLSPEPPIYNFTPNND-NLITWGGFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFR 356
                      .||..:||.|.::. |.:..|...|.:.:....:||.:.: :...|......|..
plant   392 ----------VPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPLEETV-IDLEHMKIHSSLEG 445

  Fly   357 FTAIFYHLL--PGYAIDL---ALRLWGKKPRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLW 416
            ||:...:.:  ....||.   .|...||  |.:..:..:.|..:   |:......||..||..|.
plant   446 FTSALSNTIIKQERVIDNEGGGLSTKGK--RKLNYFVSLAKTYE---PYTFFQARFDNTNTTSLI 505

  Fly   417 AKMSVEDQKLYDFNMSSVDWDDYFLQA-LAGV-RIYLAKEE 455
            .:||:|::|.:.|::..:||:.|.:.. |.|: :.:|:|::
plant   506 QEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLKKEFLSKKK 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 FAR-N_SDR_e 12..330 CDD:187547 99/358 (28%)
Sterile 362..453 CDD:460779 24/97 (25%)
FAR6NP_001326776.1 PLN02503 73..542 CDD:215279 129/490 (26%)

Return to query results.
Submit another query.