DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and FAR6

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001326776.1 Gene:FAR6 / 824837 AraportID:AT3G56700 Length:548 Species:Arabidopsis thaliana


Alignment Length:496 Identity:131/496 - (26%)
Similarity:224/496 - (45%) Gaps:77/496 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FYKDKTVFLTGGSGFLGKVTIAKLLC-TTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGNLMK- 70
            |.:.|:..:||.:|||.||.|.|||. :.|:.:|::|:|:|..:...:|  .:| :.:..:|.| 
plant    80 FLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKR--LYD-EIISSDLFKL 141

  Fly    71 ------TNPEAL--KRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAV 127
                  ::.||.  ::::|..||.:|.:||:.:....::.:|:.::|.......|.:....||:|
plant   142 LKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIKSEIANMISEEIDVIISCGGRTTFDDRYDSALSV 206

  Fly   128 NTRATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLD 192
            |......::...|....|:.|:|.||||    |....|....|...|..|.|...| :|..||  
plant   207 NALGPGRLLSFGKGCRKLKLFLHFSTAY----VTGKREGTVLETPLCIGENITSDL-NIKSEL-- 264

  Fly   193 KMAPALMGKY----------------------PNTYTYTKALTEQVIQKEAKDLPLSIFRPGVII 235
            |:|...:.|:                      .|:||:|||:.|.||..:..:||:.|.||.:|.
plant   265 KLASEAVRKFRGREEIKKLKELGFERAQHYGWENSYTFTKAIGEAVIHSKRGNLPVVIIRPSIIE 329

  Fly   236 ASYKEPMPGWID--NLYGPIAVLYGAAFGILHITLLNLKAQAGIVPVDYCVNMVLT------CAW 292
            :||.||.||||.  .:..||.:.|  |.|.:.....:.::...|:|||...|..:.      |. 
plant   330 SSYNEPFPGWIQGTRMADPIILAY--AKGQISDFWADPQSLMDIIPVDMVANAAIAAMAKHGCG- 391

  Fly   293 NTARDTSIKLSPEPPIYNFTPNND-NLITWGGFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFR 356
                      .||..:||.|.::. |.:..|...|.:.:....:||.:.: :...|......|..
plant   392 ----------VPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPLEETV-IDLEHMKIHSSLEG 445

  Fly   357 FTAIFYHLL--PGYAIDL---ALRLWGKKPRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLW 416
            ||:...:.:  ....||.   .|...||  |.:..:..:.|..:   |:......||..||..|.
plant   446 FTSALSNTIIKQERVIDNEGGGLSTKGK--RKLNYFVSLAKTYE---PYTFFQARFDNTNTTSLI 505

  Fly   417 AKMSVEDQKLYDFNMSSVDWDDYFLQA-LAGV-RIYLAKEE 455
            .:||:|::|.:.|::..:||:.|.:.. |.|: :.:|:|::
plant   506 QEMSMEEKKTFGFDIKGIDWEHYIVNVHLPGLKKEFLSKKK 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 127/478 (27%)
FAR-N_SDR_e 12..330 CDD:187547 99/358 (28%)
Sterile 363..453 CDD:281068 24/96 (25%)
FAR6NP_001326776.1 PLN02996 77..539 CDD:215538 129/487 (26%)
FAR-N_SDR_e 84..426 CDD:187547 99/364 (27%)
FAR_C <471..539 CDD:176924 20/72 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.960

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