DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and FAR5

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_190041.2 Gene:FAR5 / 823580 AraportID:AT3G44550 Length:496 Species:Arabidopsis thaliana


Alignment Length:523 Identity:133/523 - (25%)
Similarity:239/523 - (45%) Gaps:96/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATDVQSFYKDKTVFLTGGSGFLGKVTIAKLL-CTTEVKRIYVLLRAKRGQ--EMRERCAAWDKD 62
            |..:...|.::||:.:||.:|||.||.:.|:| ....||::|:|:||...:  ..|.|...::|:
plant     1 MELNCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKE 65

  Fly    63 PVFGNLM------KTNPEALKRVVPCGGDCQEPDLGLSNSD-RQVLIDEVQIVIHTAATVRFVEP 120
             :|..|.      |.|....::||...||.....||:::|. |:.:..|:.||::.|||..|.|.
plant    66 -LFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFDER 129

  Fly   121 LHIALAVNTRATRLMIQLAKEMSHLESFVHVSTAYSNC------------VVEHVSERFYPEHLT 173
            ..:.|.:||.....::..||:...::..:||||||. |            ::|.:..        
plant   130 YDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYV-CGEKPGLIPEKPFIMEEIRN-------- 185

  Fly   174 CPAEKILELLESISPELLDK-----------------------MAPALMGKYPNTYTYTKALTEQ 215
               |..|:|..::..||:.:                       |..|.:..:||||.:||::.|.
plant   186 ---ENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYVFTKSMGEM 247

  Fly   216 VIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAFGILHITLLNLKAQAGIVPV 280
            ::.|..::|||.|.||.:|.::..||.||||:.|....:|:.....|:|...|:::.:...::||
plant   248 LLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPV 312

  Fly   281 DYCVNMVLTCAWNTARDTSIKLSPEPPIYNFTPNNDNLITWGGFRDKAARLRYTYPL-------- 337
            |...|.::|.|...|..:.:.:     :|:...::.|.:|:|...:.|.|.....||        
plant   313 DMVANAMITAAAKHAGGSGVHM-----VYHVGSSHQNPVTFGEIHEIAVRYFTKNPLRSRNGSLI 372

  Fly   338 --TKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLA--LRLW------GKKPRMIKLYDKIHK 392
              :|:.::|.:.      ||.......:.||...:.|.  :..|      |.|.|.|:|   :.:
plant   373 TVSKVRFIPTMA------LFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDKNRKIEL---VMR 428

  Fly   393 NIDILAPFVITSWSFDTVNTRKLWAKMSVEDQK-----LYDFNMSSVDWDDYFLQA-LAGVRIYL 451
            .:::..|:|:....||..||:.|.|....|:.|     ::||:...::|.||.... ::|:..::
plant   429 LVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGDYLTNIHISGLVTHV 493

  Fly   452 AKE 454
            .|:
plant   494 LKK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 131/507 (26%)
FAR-N_SDR_e 12..330 CDD:187547 98/362 (27%)
Sterile 363..453 CDD:281068 25/103 (24%)
FAR5NP_190041.2 PLN02996 1..495 CDD:215538 132/520 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.960

Return to query results.
Submit another query.