DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG10096 and FAR4

DIOPT Version :9

Sequence 1:	NP_001027183.1	Gene:	CG10096 / 3772183	FlyBaseID:	FBgn0038032	Length:	502	Species:	Drosophila melanogaster
Sequence 2:	NP_190040.3	Gene:	FAR4 / 823579	AraportID:	AT3G44540	Length:	493	Species:	Arabidopsis thaliana

Alignment Length:	509	Identity:	154/509 - (30%)
Similarity:	241/509 - (47%)	Gaps:	71/509 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MATDVQSFYKDKTVFLTGGSGFLGKVTIAKLL-CTTEVKRIYVLLRAKRGQEMRER--CAAWDKD 62
            |.::...|..|||:.:||..|||.||.:.|:| ...:||::::||||...:...:|  ....:||
plant     1 MDSNCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65

  Fly    63 --PVFGNLMKTNPEALK-----RVVPCGGDCQEPDLGLSNSD-RQVLIDEVQIVIHTAATVRFVE 119
              .|..|.:  ..|.||     :|||..||....:||:..|| .|.:.:|:.|:::.|||..|.|
plant    66 LFRVLKNAL--GDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTNFDE 128

  Fly   120 PLHIALAVNTRATRLMIQLAKEMSHLESFVHVSTAY-----SNCVVE---HVSERFYPEHLTCPA 176
            ...:.|:|||.....::..||:....:..:||||||     |..:.|   |:.|.. ..|.....
plant   129 RYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETL-NGHRKLVI 192

  Fly   177 EKILELL--------------ESISPELLD-KMAPALMGKYPNTYTYTKALTEQVIQKEAKDLPL 226
            |..:||:              |.||..:.| .|:.|.:..:||||.:||::.|.::....::||:
plant   193 ETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGEMLLGNYRENLPI 257

  Fly   227 SIFRPGVIIASYKEPMPGWIDNL--YGPIAVLYGAAFGILHITLLNLKAQAGIVPVDYCVNMVLT 289
            .|.||.:|.:::.||.||||:.|  ...:.|.||.  |.|...|.:..:...::|||...|.::|
plant   258 VIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGK--GRLKCFLADPNSVLDLIPVDMVANAMVT 320

  Fly   290 CAWNTARDTSIKLSPEPPIYNFTPNNDNLITWGGFRDKAARLRYTYPLTKMMWLPFL--HCTTIP 352
            .|...|.    ||..: .:|:...:..|.||:....|.||......||.:......|  ..|.:.
plant   321 AAAIHAG----KLGSQ-TVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILS 380

  Fly   353 WLFRFTAIFYHLLPGYAIDL-ALRL-------W-GKK----PRMIKLYDKIHKNIDILAPFVITS 404
            .:.:|:  ||..| .|.:.| .|||       | |.|    .|.|||..::   :|:..|:|:..
plant   381 TMAQFS--FYMTL-RYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLAMRL---VDLYRPYVLFK 439

  Fly   405 WSFDTVNTRKLWAK---MSVEDQKLYDFNMSSVDWDDYFLQA-LAGVRIYLAKE 454
            ..||..||.||..|   ::.|...|::|:..|:||:||.... :.|:..|:.|:
plant   440 GIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPGLITYVLKK 493

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10096	NP_001027183.1	PLN02996	1..441	CDD:215538	151/493 (31%)
		FAR-N_SDR_e	12..330	CDD:187547	109/353 (31%)
		Sterile	363..453	CDD:281068	33/106 (31%)
FAR4	NP_190040.3	PLN02996	1..492	CDD:215538	153/506 (30%)
		FAR-N_SDR_e	12..362	CDD:187547	110/359 (31%)
		Sterile	393..492	CDD:281068	32/101 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	159	1.000	Domainoid score	I1277
eggNOG	1	0.900	-	-		E1_COG3320
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I1437
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000172
OrthoInspector	1	1.000	-	-		mtm964
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11011
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X145
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	8.960