Protein Alignment CG10096 and MS2

DIOPT Version :10

• Sequence 1: NP_001027183.1
• Gene: CG10096 / 3772183
• FlyBaseID: FBgn0038032
• Length: 502
• Species: Drosophila melanogaster
• Sequence 2: NP_187805.1
• Gene: MS2 / 820372
• AraportID: AT3G11980
• Length: 616
• Species: Arabidopsis thaliana
• Alignment Length: 518
• Identity: 137/518 - (26%)
• Similarity: 227/518 - (43%)
• Gaps: 101/518 - (19%)

  Fly     7 SFYKDKTVFLTGGSGFLGKVTIAKLL-CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPV-----F 65
            ||.:.|...:||.:|||.||.|.|:| ...:|.:||:|::||..:...||.    |:.|     |
plant   126 SFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERL----KNEVLDAELF 186

  Fly    66 GNLMKTNPEA-----LKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIAL 125
            ..|.:|:..:     |.:::|..|:..:.::||.....:.:..||.::|::||...|.|...:||
plant   187 NTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQADSAEEIAKEVDVIINSAANTTFNERYDVAL 251

  Fly   126 AVNTRATRLMIQLAKEMSHLESFVHVSTAYSN----------------CVVEHVSERFYPEHLTC 174
            .:|||....::..||:...|:.|:.|||||.|                |:   .:|.|...:
plant   252 DINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCI---ATENFLEGN--- 310

  Fly   175 PAEKILEL-------LESI-----SPELLDKMAPALMGK-----YPNTYTYTKALTEQVIQKEAK 222
              .|.|::       ||:.     :.:...||....:.:     :.:||.:|||:.|.:|.....
plant   311 --RKALDVDREMKLALEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYVFTKAMGEMMINSTRG 373

  Fly   223 DLPLSIFRPGVIIASYKEPMPGWID--NLYGPIAVLYGAAFGILHITLLNLKAQAGIVPVDYCVN 285
            |:|:.|.||.||.::||:|.|||::  .:..||.:.||.  |.|...|::.|....:||.|..||
plant   374 DVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGK--GQLTGFLVDPKGVLDVVPADMVVN 436

  Fly   286 MVLTCAWNTARDTSIKLSPEPPI--YNFTPNNDNLITWGGFRDKAARLRYTYPLTKMMWLPFLHC 348
            ..|..   .|:.......|||.|  |....:..|.:.   |.| .|.|.|.:..|.    |.:..
plant   437 ATLAA---IAKHGMAMSDPEPEINVYQIASSAINPLV---FED-LAELLYNHYKTS----PCMDS 490

  Fly   349 TTIPWLFRFTAIFYHLLPGYAIDLALRLW-----------GKKPRMIKLYDKI----HKNID--- 395
            ...|.:.|...:|     ....|.:..||           |......|:..|:    .|:::
plant   491 KGDPIMVRLMKLF-----NSVDDFSDHLWRDAQERSGLMSGMSSVDSKMMQKLKFICKKSVEQAK 550

  Fly   396 ----ILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQA-LAGVRIYLAK 453
                |..|:......||..||::|...||.::::.:.|::.|::|.||.... :.|:|.::.|
plant   551 HLATIYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVLK 613

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG10096	NP_001027183.1	FAR-N_SDR_e	12..330	CDD:187547	103/365 (28%)
		Sterile	362..453	CDD:460779	23/113 (20%)
MS2	NP_187805.1	PLN02503	1..616	CDD:215279	137/518 (26%)