DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and FarO

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster


Alignment Length:511 Identity:145/511 - (28%)
Similarity:256/511 - (50%) Gaps:41/511 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATDVQSFYKDKTVFLTGGSGFLGKVTIAKLLCTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVF 65
            ::.:::.|::|..:|:|||||.:||..:.|||.:..|:|||||||.::.....:|.....:..||
  Fly     5 LSGEMEEFFEDSEIFVTGGSGVVGKALVEKLLRSCNVRRIYVLLRPRKQLTAEQRLVRLRQATVF 69

  Fly    66 GNLMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTR 130
            ..|....||.|.::|...||...|.||:..|..| .:..|.:|.|.||||||.|||..|:.:|..
  Fly    70 HVLAVQKPEELDKIVAVPGDVSLPGLGIDPSMMQ-RMKGVSLVYHCAATVRFDEPLREAVRLNVG 133

  Fly   131 ATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHL---TCPAEKILELLESISPE-LL 191
            .|...::.|:.:..|.:|:||||.|||..:..|..::|...:   .|     |.:::.::.: :|
  Fly   134 GTLEALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLC-----LRMIDDVADDGML 193

  Fly   192 DKMAPALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVL 256
            :.:...|:..:|||||:||.|.|.::......||:.::||.:::.:.::|.||:..:|.|.:.:.
  Fly   194 NALTRKLIMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLF 258

  Fly   257 YGAAFGILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSP-EPPIY----------N 310
            .....|||....|....:..|.|.|..:..:| |......|...:..| :.|::          .
  Fly   259 ALVGAGILKTVYLGKDIRLDITPQDIGIKSML-CYTKMGYDIYRQGPPADLPVFLSSSCTHVPHT 322

  Fly   311 FTPNNDNLITWGGFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALR 375
            ||...:.:.|...:||.|        ..|.:.:|..|.|...|.::|......:||...:||.||
  Fly   323 FTQIAEQMDTLDLWRDVA--------FEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILDLLLR 379

  Fly   376 LWGKKPRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFN-MSSVDWDDY 439
            ::|:||.::....|.::.::::.||:..:|....|:..:..:|..  :...::|: .:..|....
  Fly   380 IFGQKPVLMSAVRKAYQTLEVMQPFMFNNWDSPGVSDMETLSKHG--EGSAFNFDAFNHPDIHGL 442

  Fly   440 FLQA----LAGVRIYLAKEEPGQEVVERGRKIYKRFEFLHRLLQFTLCGGAALILW 491
            .:|:    |..:|.:|.:|:|  :.:||.::|.:...||:|||:..|.  ..||||
  Fly   443 VIQSCSNMLHSIRTHLLREDP--KTLERSKRILRIKVFLYRLLRLFLL--YKLILW 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 126/455 (28%)
FAR-N_SDR_e 12..330 CDD:187547 101/332 (30%)
Sterile 363..453 CDD:281068 21/94 (22%)
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 97/316 (31%)
FAR_C 379..>410 CDD:296071 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466747
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
87.840

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