DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and CG12268

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001247272.1 Gene:CG12268 / 42833 FlyBaseID:FBgn0039131 Length:531 Species:Drosophila melanogaster


Alignment Length:508 Identity:161/508 - (31%)
Similarity:279/508 - (54%) Gaps:33/508 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TDVQSFYKDKTVFLTGGSGFLGKVTIAKLL--CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVF 65
            :|:..||.:||:.:||.:||:|||.:.|||  | .::..||:|:|.|:|.:...|...:.|..:|
  Fly    13 SDIAKFYANKTILITGATGFMGKVLVEKLLRSC-ADLNVIYLLIRTKKGVDPSVRKEQYFKCVIF 76

  Fly    66 GNLMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTR 130
            |.|::.||..:.:|....||..|||||||.:|...|...|::|.|.||.|||.:||...:.:|..
  Fly    77 GKLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLRPMVMMNVV 141

  Fly   131 ATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAE--KILELLESISPELLDK 193
            .|..:::||::||.|::.|||||:|..|....:.||.||    .|..  .|:|::|::..|.|.:
  Fly   142 GTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYP----APQNPFSIIEMVETMDDEALAE 202

  Fly   194 MAPALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYG 258
            :.|.|:...||||.|:|||:|.:|.:....||:.|.||.::.|:..||:||||:.:.||..::.|
  Fly   203 ITPKLLNGLPNTYAYSKALSEDLICRYNNKLPIIITRPSIVTAAIHEPLPGWIEGVNGPTGLMIG 267

  Fly   259 AAFGILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSPEPPI--YNFTPNNDNLITW 321
            ||.|::.....|....:.::|||..:|.::.|.:...:.:..|.:.:..:  .|...::..|::|
  Fly   268 AARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGNKQTGVEFCNLCISSKALMSW 332

  Fly   322 GGFRDKAARLRYTYPLTKMMWLP-------FLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGK 379
            |...:...|..|..||:..:|.|       :.|       ..|..||:|.||.|.||..|.::|:
  Fly   333 GDSIETGRRFFYETPLSFALWYPGGSIKKNYYH-------HLFCVIFFHYLPAYFIDFWLLVFGQ 390

  Fly   380 KPRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQAL 444
            ||.::.:..|:...:.:|..:....|.|.....:::.:::|:.||.|:|.::..|:|:.|....:
  Fly   391 KPFLLNVQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLSLLDQDLFDTSVGQVNWETYISNYI 455

  Fly   445 AGVRIYLAKEEPGQEVVERGRKIYKR---FEFLHRLLQFTLCGGAALILWSIL 494
            .|:|.|:..|  .::.:.:.||:.:|   .:::.::|.|:|   :...||:.|
  Fly   456 VGMRTYILGE--SEDTLPQARKVLRRLYILDWVSKVLFFSL---SFWFLWTHL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 148/450 (33%)
FAR-N_SDR_e 12..330 CDD:187547 113/323 (35%)
Sterile 363..453 CDD:281068 25/89 (28%)
CG12268NP_001247272.1 PLN02996 12..463 CDD:215538 151/461 (33%)
FAR-N_SDR_e 22..347 CDD:187547 115/329 (35%)
FAR_C 372..463 CDD:176924 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466765
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.890

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