DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and far1

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_005174372.1 Gene:far1 / 406829 ZFINID:ZDB-GENE-040426-2908 Length:518 Species:Danio rerio


Alignment Length:497 Identity:174/497 - (35%)
Similarity:262/497 - (52%) Gaps:24/497 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQSFYKDKTVFLTGGSGFLGKVTIAKLLCTTE-VKRIYVLLRAKRGQEMRERCAAWDKDPVFGNL 68
            :..:|..|.|.:||.:||:|||.:.|||.:.. ||..|||:|.|.||....|.|......:|..|
Zfish     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLFDRL 68

  Fly    69 MKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRATR 133
            .:..|:...::|....|..:|:|.||..|::.|...:.:|.|.|||:||.|||..|:.:|..||:
Zfish    69 REDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLATQ 133

  Fly   134 LMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAE--KILELLESISPELLDKMAP 196
            .|:.||..|.|||.|:||||||:||..|.:.|..||.    |.:  |:::.||.:..:|:..|.|
Zfish   134 KMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPP----PVDYRKLIDTLEWMDDKLVSLMTP 194

  Fly   197 ALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAF 261
            .|:|:.||||||||||.||::|:|..:|.::|.||.::.||:|||.||||||..||..:...|..
Zfish   195 RLLGERPNTYTYTKALAEQLVQQECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGIFIAAGK 259

  Fly   262 GILHITLLNLKAQAGIVPVDYCVNMVLTCAWNT-----ARDTSIKLSPEPPIYNFTPNNDNLITW 321
            |||.....:..|.|.:||||..:|..|..||.:     ||..|:.      :||.|....|...|
Zfish   260 GILRTMRASNNAVADLVPVDVVINTTLAAAWYSGSQRHARPRSLL------VYNCTTGGINPFHW 318

  Fly   322 GGFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKL 386
            |.............||.:....|.::.||...:.::.....|..|.:..||.||:.|::|||:|.
Zfish   319 GEVEYHVISTFKRNPLEQAFRRPNVNLTTNHLINQYWIAVSHKAPAFLYDLFLRMSGREPRMMKT 383

  Fly   387 YDKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIYL 451
            ..::||.:.:|..|...||.::|.|...|..:|..||:|:::|::..:.|.:|......|.:.|:
Zfish   384 ITRLHKAMMVLEYFTSHSWVWNTDNVTMLMNQMGAEDKKVFNFDVRQLHWAEYMENYCMGTKKYV 448

  Fly   452 AKEEPGQEVVERGRKIYKRFEFLHRLLQFTLCGGAALILWSI 493
            ..||  ...:...||...:.    |.:::|......:::|.|
Zfish   449 LNEE--LSGLPAARKHLNKL----RNIRYTFNTVLVVLIWRI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 164/443 (37%)
FAR-N_SDR_e 12..330 CDD:187547 131/325 (40%)
Sterile 363..453 CDD:281068 29/89 (33%)
far1XP_005174372.1 FAR-N_SDR_e 11..333 CDD:187547 131/331 (40%)
Sterile 360..450 CDD:308580 29/89 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

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