DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and Far2

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:493 Identity:166/493 - (33%)
Similarity:268/493 - (54%) Gaps:17/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQSFYKDKTVFLTGGSGFLGKVTIAKLLCTT-EVKRIYVLLRAKRGQEMRERCAAWDKDPVFGNL 68
            :.:||.:|::.:||.:||||||.:.||..|: .:|.||:|:|.|.||.::||........:|..:
Mouse     4 IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFEKV 68

  Fly    69 MKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRATR 133
            .:..|...:::.|...|..:.|..:|..|.|.|:....|:.|.||||||...|..|:.:|..||:
Mouse    69 KEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTATQ 133

  Fly   134 LMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAE--KILELLESISPELLDKMAP 196
            .::.:|.:|..||:|:|:|||:|||.:.|:.|..||    ||.|  ||::.:|.:...:::::.|
Mouse   134 QLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYP----CPVEPRKIIDSMEWLDDSIIEEITP 194

  Fly   197 ALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAF 261
            .|:|..||||||||||.|.|:|:|:.:|.::|.||.::.|:::||.|||:|||.||..::.....
Mouse   195 KLIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGK 259

  Fly   262 GILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSPEPPIYNFTPNNDNLITWGGFRD 326
            |.|........|.|.::|||..||:.:...|.||    :.......||:.|..|.|...|.....
Mouse   260 GFLRSIKATPMAVADVIPVDTVVNLTIAVGWYTA----VHRPKSTLIYHSTSGNLNPCNWYKMGL 320

  Fly   327 KAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKLYDKIH 391
            :........|.......|....||..:...:.....|.:|....|..|||.|:||||:||.:::.
Mouse   321 QVLATIEKIPFESAFRRPNADFTTSNFTTHYWNTVSHRVPAIIYDFYLRLTGRKPRMLKLMNRLL 385

  Fly   392 KNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIYLAKEEP 456
            |.|.:|..|:..||.:.|.||..|.:::|.|||::::|::..::|.:|....:.||:.||.||:.
Mouse   386 KTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDL 450

  Fly   457 GQEVVERGRKIYKRFEFLHRLLQFTLCGGAALILWSIL 494
            ..  :.:.::..:|...:|.|....|    .||:|.:|
Mouse   451 AG--IPKAKQHLRRLRNIHYLFNTAL----FLIIWRLL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 152/438 (35%)
FAR-N_SDR_e 12..330 CDD:187547 116/320 (36%)
Sterile 363..453 CDD:281068 34/89 (38%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 115/311 (37%)
Sterile 357..447 CDD:397244 34/89 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847922
Domainoid 1 1.000 96 1.000 Domainoid score I7295
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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