DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10096 and Far1

DIOPT Version :10

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:455 Identity:164/455 - (36%)
Similarity:250/455 - (54%) Gaps:13/455 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQSFYKDKTVFLTGGSGFLGKVTIAKLL--CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGN 67
            :..:|:.|.:.|||.:||||||.:.|||  | .:|..:|||:|.|.||..:||........:|..
  Rat     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSC-PKVNSVYVLVRQKAGQTPQERVEEILSGKLFDR 67

  Fly    68 LMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRAT 132
            |...||:..::::....:..:|.|.||..|::::||...::.|.||||||.|.|..|:.:|..||
  Rat    68 LRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIAT 132

  Fly   133 RLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMAPA 197
            |.:|.||::|.:||.|:||||||:.|..:|:.|..||..:  ..:|:::.||.:...|::.:.|.
  Rat   133 RQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPV--DPKKLIDSLEWMDDGLVNDITPK 195

  Fly   198 LMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAFG 262
            |:|..||||.|||||.|.|:|:|...|.::|.||.::.||:|||.||||||..||..:...|..|
  Rat   196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260

  Fly   263 ILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTA--RDTSIKLSPEPPIYNFTPNNDNLITWGGFR 325
            ||.....:..|.|.:||||..||..|..||.:.  |..:|.      :||.|..:.|...||...
  Rat   261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM------VYNCTTGSTNPFHWGEVG 319

  Fly   326 DKAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKLYDKI 390
            |.......|.||.::...|::...:...:..:.....|.:|...:||||||.|:||.|:|...::
  Rat   320 DYLNHSFKTNPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLTGQKPWMMKTITRL 384

  Fly   391 HKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIYLAKEE 455
            ||.:..|..|...||.::|.|...|..:::.||:|.::.::..:.|.:|......|.:.|:..||
  Rat   385 HKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCMGTKKYVLNEE 449

  Fly   456  455
              Rat   450  449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 FAR-N_SDR_e 12..330 CDD:187547 128/321 (40%)
Sterile 362..453 CDD:460779 29/90 (32%)
Far1NP_001011933.1 FAR-N_SDR_e 11..330 CDD:187547 129/327 (39%)
Sterile 371..447 CDD:460779 21/75 (28%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507
Blue background indicates that the domain is not in the aligned region.

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