DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10096 and far1

DIOPT Version :9

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:458 Identity:167/458 - (36%)
Similarity:251/458 - (54%) Gaps:16/458 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQSFYKDKTVFLTGGSGFLGKVTIAKLL--CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGN 67
            :..||:.|.|.:||.:||:|||.:.|||  | ..||.:|||:|.|..|:.|||.|......:|..
 Frog     4 IPEFYRGKNVLITGATGFMGKVLLEKLLRSC-PNVKAVYVLVRPKASQKPRERVAEMMSCKLFDR 67

  Fly    68 LMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRAT 132
            |....||..::|:....:..:|:|.||..|:.:|||.:.||.|.||||||.|.|..|:.:|..||
 Frog    68 LRDEQPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIAT 132

  Fly   133 RLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMAPA 197
            |.::.||:::..||.|:||||||:||..:.:.|..||..:  ..:|::|.||.:...|::.:.|.
 Frog   133 RQLLYLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPPPV--DPKKLIESLEWMDDGLVNDITPK 195

  Fly   198 LMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAFG 262
            |:|..||||||||||.|.|:|:|...|.::|.||.::.||:|||.||||||..||..:...|..|
 Frog   196 LIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260

  Fly   263 ILHITLLNLKAQAGIVPVDYCVNMVLTCAWNT-----ARDTSIKLSPEPPIYNFTPNNDNLITWG 322
            ||.....:..|.|.::|||..||..|..||.:     :|..:|.      :||.|....|...||
 Frog   261 ILRTMRASNNAVADLIPVDVVVNTTLAAAWYSGVNRYSRPRNIL------VYNCTTGGTNPFHWG 319

  Fly   323 GFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKLY 387
            .............||.:....|.::.|:...|:.:.....|..|.:..|:.||:.|:.|||:|..
 Frog   320 EVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDVYLRITGRSPRMMKTI 384

  Fly   388 DKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIYLA 452
            .::||.:.:|..|...||.::..||..|.:::|.:|:|.::|::..:.|.:|......|.:.|:.
 Frog   385 TRLHKAMMLLEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENYCMGTKKYVL 449

  Fly   453 KEE 455
            .||
 Frog   450 NEE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 PLN02996 1..441 CDD:215538 163/442 (37%)
FAR-N_SDR_e 12..330 CDD:187547 131/324 (40%)
Sterile 363..453 CDD:281068 27/89 (30%)
far1XP_017948360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8217
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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