DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10096 and far1

DIOPT Version :10

Sequence 1:NP_001027183.1 Gene:CG10096 / 3772183 FlyBaseID:FBgn0038032 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:458 Identity:167/458 - (36%)
Similarity:251/458 - (54%) Gaps:16/458 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VQSFYKDKTVFLTGGSGFLGKVTIAKLL--CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGN 67
            :..||:.|.|.:||.:||:|||.:.|||  | ..||.:|||:|.|..|:.|||.|......:|..
 Frog     4 IPEFYRGKNVLITGATGFMGKVLLEKLLRSC-PNVKAVYVLVRPKASQKPRERVAEMMSCKLFDR 67

  Fly    68 LMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRAT 132
            |....||..::|:....:..:|:|.||..|:.:|||.:.||.|.||||||.|.|..|:.:|..||
 Frog    68 LRDEQPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIAT 132

  Fly   133 RLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMAPA 197
            |.::.||:::..||.|:||||||:||..:.:.|..||..:  ..:|::|.||.:...|::.:.|.
 Frog   133 RQLLYLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPPPV--DPKKLIESLEWMDDGLVNDITPK 195

  Fly   198 LMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAFG 262
            |:|..||||||||||.|.|:|:|...|.::|.||.::.||:|||.||||||..||..:...|..|
 Frog   196 LIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260

  Fly   263 ILHITLLNLKAQAGIVPVDYCVNMVLTCAWNT-----ARDTSIKLSPEPPIYNFTPNNDNLITWG 322
            ||.....:..|.|.::|||..||..|..||.:     :|..:|.      :||.|....|...||
 Frog   261 ILRTMRASNNAVADLIPVDVVVNTTLAAAWYSGVNRYSRPRNIL------VYNCTTGGTNPFHWG 319

  Fly   323 GFRDKAARLRYTYPLTKMMWLPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALRLWGKKPRMIKLY 387
            .............||.:....|.::.|:...|:.:.....|..|.:..|:.||:.|:.|||:|..
 Frog   320 EVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDVYLRITGRSPRMMKTI 384

  Fly   388 DKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVDWDDYFLQALAGVRIYLA 452
            .::||.:.:|..|...||.::..||..|.:::|.:|:|.::|::..:.|.:|......|.:.|:.
 Frog   385 TRLHKAMMLLEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENYCMGTKKYVL 449

  Fly   453 KEE 455
            .||
 Frog   450 NEE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10096NP_001027183.1 FAR-N_SDR_e 12..330 CDD:187547 131/324 (40%)
Sterile 362..453 CDD:460779 27/90 (30%)
far1XP_017948360.1 FAR-N_SDR_e 11..333 CDD:187547 131/330 (40%)
Sterile 360..450 CDD:460779 27/89 (30%)

Return to query results.
Submit another query.