Protein Alignment Sxl and PAB3

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_173690.1
• Gene: PAB3 / 838882
• AraportID: AT1G22760
• Length: 660
• Species: Arabidopsis thaliana
• Alignment Length: 365
• Identity: 93/365 - (25%)
• Similarity: 152/365 - (41%)
• Gaps: 83/365 - (22%)

  Fly   110 NDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 174
            |.|....||:.|..||:::.:.||...|...|.|::..:||| ::|.|..:.||:|.....:..|
plant   222 NTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASA 285

  Fly   175 IKVLNGITVRNKRLKVSYARPGGESIKD------------------TNLYVTNLPRTITDDQLDT 221
            ::.:|||::.:..|.|..|:...|..::                  .|||:.||..::.|::|..
plant   286 VEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKE 350

  Fly   222 IFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 286
            :|.:||::....::.:. .|..||..||.|:..|||..|:|.:|..:.  |.:||.:.||:.. :
plant   351 MFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALRALSEMNGKMI--GRKPLYIALAQRK-E 411

  Fly   287 AKAAHFMSQMGVVPA-------NVPP--PPPQPPAHMAAAFNMMHRDGAMEKLRSLFDAICDAIF 342
            .:.||..:....:.|       :.||  |.|.||.||....|    ..:|...:.:.       :
plant   412 DRRAHLQALFSQIRAPGPMSGFHHPPGGPMPGPPQHMYVGQN----GASMVPSQPIG-------Y 465

  Fly   343 GLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQA---LGFTSSSNNSIGNGNGNDNNM 404
            |...:....:..|.....:..||    |      ||.|.|.   :||...:.|.
plant   466 GFQPQFMPGMRPGSGPGNFIVPY----P------LQRQPQTGPRMGFRRGATNV----------- 509

  Fly   405 LLYHQQYHQQQTQQQRLGNVAAHNISP-----NGSNNNIN 439
                    ||..|||:|.:   .|.||     ||::|..|
plant   510 --------QQHIQQQQLMH---RNPSPGMRYMNGASNGRN 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	25/79 (32%)
		RRM2_Hu_like	203..281	CDD:240822	25/77 (32%)
PAB3	NP_173690.1	PABP-1234	49..644	CDD:130689	93/365 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910